Flagship Cruises & Events is a locally owned and family-operated yacht charter, cruise, and events company established in 1915, offering luxury maritime experiences on San Diego Bay including narrated harbor tours, dinner cruises, private charters for corporate events, weddings, birthdays, and celebrations with customizable menus and amenities across a fleet accommodating up to 600 guests.

Eco Boat Rentals offers some of the most unique and family-friendly boat rentals in San Diego, located in the scenic Point Loma area along San Diego Bay. Specializing in eco-friendly pedal boats and electric boats, this local favorite is perfect for relaxed daytime sightseeing, picnics on the water, and dog-friendly adventures. Guests of all experience levels can enjoy calm harbor cruising while taking in views of downtown San Diego, Shelter Island, and nearby marinas, making it an ideal outing for families, couples, and visitors looking for a laid-back waterfront experience. For unforgettable evenings and special occasions, Eco Boat Rentals is also known for its Glow Boat night rides and eye-catching Pink Party Boat charters. These experiences are popular for date nights, birthdays, bachelorette parties, and private celebrations, offering illuminated boats, music, and a fun, social atmosphere on the bay. With a strong focus on safety, affordability, and memorable moments, Eco Boat Rentals stands out as a top choice for creative and eco-conscious boat experiences in San Diego.

Alana Yacht Rental delivers a premium private yacht and bay cruise experience aboard San Diego Bay’s newest and largest power catamaran. Based at Shelter Island, Alana offers both ticketed public bay cruises and fully private yacht charters, complete with a licensed captain, professional crew, and onboard bartender. With capacity for up to 35 guests, Alana is designed for comfort, style, and unforgettable views of San Diego’s most iconic waterfront landmarks, including the Coronado Bridge, USS Midway, and downtown skyline. Ideal for birthdays, bachelorette and bachelor parties, corporate events, weddings, or casual harbor cruises, Alana combines modern amenities with a fun, social atmosphere. Guests enjoy spacious forward and aft decks, two modern bathrooms, a full bar with drinks available for purchase, high-quality sound systems, and easy water access for swim stops. Known for exceptional service and glowing customer reviews, Alana Yacht Rental is a standout choice for anyone looking to experience San Diego Bay in a private, elevated, and memorable way.

Sail San Diego offers an easy, laid-back, and truly local way to experience San Diego Bay, delivering unforgettable sailing adventures since 1988. From sunset sails and private charters to seasonal whale watching excursions, Sail San Diego combines classic sailing with modern comfort and personalized service. Guests sail aboard premium vessels led by friendly, US Coast Guard–certified captains, enjoying sweeping coastal views, iconic landmarks, and the relaxed Southern California lifestyle that makes San Diego special. Perfect for couples, families, corporate outings, and large group events, Sail San Diego provides both ticketed and private sailing experiences tailored to your group. With beer, soda, and snacks included, no crowds to navigate, and flexible options for everything from intimate sails to groups of over 100, every trip feels effortless and personal. Locally owned and deeply rooted in the community, Sail San Diego feels less like a tour and more like sailing with friends—if your friends happened to have an amazing boat.

Tiki Time Bay Tours offers unforgettable San Diego boat rides and private charters on a floating Tiki hut, led by professional improvisors for fun, laughter, and unique harbor cruises. They provide public individual ticketed tours and private whole-boat charters for up to 30 people for events like birthdays, bachelorette parties, and corporate events, with entertainment options, BYOB, and sights including USS Midway, Star of India, and Coronado Bridge.

Cruise San Diego offers intimate sunset cruises and private boat charters departing from Mission Bay, delivering a relaxed and memorable way to experience San Diego from the water. Known for their popular Mission Bay Sunset Cruise, guests enjoy stunning coastal views, vibrant skies, and a laid-back atmosphere while cruising aboard comfortable vessels with onboard bar service from the carbon-neutral Mahalo Bar. Whether you’re visiting San Diego or a local looking for a unique way to unwind, Cruise San Diego provides scenic bay cruises that highlight the city’s natural beauty and coastal charm. In addition to sunset cruises, Cruise San Diego specializes in private charters for weddings, birthdays, corporate outings, celebrations, and special events, with flexible scheduling and customizable experiences. Family-owned and operated, the company emphasizes friendly service, sustainability, and locally sourced offerings, making them a trusted choice for boat tours in San Diego. With daytime cruises, DJ cruises, seasonal fireworks cruises, and private charters available, Cruise San Diego is a top option for sunset cruises, bay tours, and private boat experiences in Mission Bay.

Waterhorse Charters is a San Diego-based marine entertainment company offering friendly boat charters focused on scuba diving, snorkeling, freediving, wildlife watching, party cruises, and bay cruises. They prioritize kindness, safety, community, and comfort with spacious vessels like the Humboldt (22 passengers) and Orion, sailing from Mission Bay Harbor. Services include weekly trips to Wreck Alley, La Jolla Ecological Reserve, Point Loma kelp forest, and Coronado Islands, with amenities like hot showers, soup, snacks, and equipment support.

Paddle Pub San Diego offers a 26-passenger, pedal-powered pontoon boat for ultimate water parties on Mission Bay. Features include a sound system, 12 pedaling stations, large backbench, party lighting, and BYOB with provided coolers and restroom. Ideal for birthdays, bachelorette parties, company outings, and group celebrations with optional pedaling, music, games, and scenic cruises.

San Diego's boutique scuba diving charter boat owned and operated by divers. Offers recreational and technical diving trips with small groups for uncrowded sites, knowledgeable crew trained for all levels from Open Water to Technical divers, emphasizing safety, family-like atmosphere, and stress-free experiences. Also provides bay cruises and party boat options.

Romancing the Wind (Sailing RTW) is San Diego's premier private yacht charter service on San Diego Bay, operating the 60-foot custom-built all-steel ketch sailboat RTW. It specializes in personalized sailing experiences for events including corporate gatherings, bachelor/bachelorette parties, birthdays, family reunions, weddings, cocktail cruises, sunset excursions, swim charters, bay tours, and Burial at Sea services, with USCG certification for up to 41 passengers and crew combined, though regular capacity is limited to 30 for comfort (up to 35 upon approval).

Mai Tai Yacht Charters International offers luxury yacht charters and private boat rentals in San Diego Bay and Cabo San Lucas, specializing in unforgettable on-the-water experiences for groups of all sizes. With a diverse fleet of fully crewed power and sailing yachts accommodating up to 85 guests, Mai Tai is a popular choice for private yacht charters, party boat rentals, sunset cruises, corporate events, and special occasions. Their charters are fully customizable, making them ideal for bachelorette and bachelor parties, birthdays, weddings, media events, and upscale social gatherings, all set against the scenic backdrop of San Diego’s iconic waterfront. Departing from premier marinas on San Diego Bay, Mai Tai Yacht Charters delivers a high-end experience with professional captains, attentive crew, and personalized service designed to exceed expectations. Guests enjoy panoramic skyline views, flexible itineraries, and tailored amenities including catering and entertainment options. For travelers searching for yacht rentals in San Diego, private boat charters, luxury party yachts, or Cabo San Lucas yacht experiences, Mai Tai Yacht Charters stands out as a trusted provider of premium boating adventures.

San Diego Fishing Company offers private sport fishing charters in San Diego using four pack (up to 4 passengers), six pack (up to 6 passengers), and large party vessels (7-12 passengers) for full day, overnight, and multi-day offshore trips targeting species like bluefin tuna, yellowfin tuna, dorado, and yellowtail. Charters include fuel, bait, boat, tackle, rod rentals, water, snacks, soda, and meals for longer trips; fishing licenses and alcohol are not included.